deML: robust demultiplexing of Illumina sequences using a likelihood-based approach
نویسندگان
چکیده
منابع مشابه
deML: robust demultiplexing of Illumina sequences using a likelihood-based approach
MOTIVATION Pooling multiple samples increases the efficiency and lowers the cost of DNA sequencing. One approach to multiplexing is to use short DNA indices to uniquely identify each sample. After sequencing, reads must be assigned in silico to the sample of origin, a process referred to as demultiplexing. Demultiplexing software typically identifies the sample of origin using a fixed number of...
متن کاملA Robust Desirability-based Approach to Optimizing Multiple Correlated Responses
There are many real problems in which multiple responses should be optimized simultaneously by setting of process variables. One of the common approaches for optimization of multi-response problems is desirability function. In most real cases, there is a correlation structure between responses so ignoring the correlation may lead to mistake results. Hence, in this paper a robust approach based ...
متن کاملthe use of appropriate madm model for ranking the vendors of mci equipments using fuzzy approach
abstract nowadays, the science of decision making has been paid to more attention due to the complexity of the problems of suppliers selection. as known, one of the efficient tools in economic and human resources development is the extension of communication networks in developing countries. so, the proper selection of suppliers of tc equipments is of concern very much. in this study, a ...
15 صفحه اولReconstruction of Ancestral Genomic Sequences Using Likelihood
A challenging task in computational biology is the reconstruction of genomic sequences of extinct ancestors, given the phylogenetic tree and the sequences at the leafs. This task is best solved by calculating the most likely estimate of the ancestral sequences, along with the most likely edge lengths. We deal with this problem and also the variant in which the phylogenetic tree in addition to t...
متن کاملStatistics of Robust Optimization: A Generalized Empirical Likelihood Approach
We study statistical inference and robust solution methods for stochastic optimization prob-lems. We first develop an empirical likelihood framework for stochastic optimization. We showan empirical likelihood theory for Hadamard differentiable functionals with general f -divergencesand give conditions under which T (P ) = infx∈X EP [`(x; ξ)] is Hadamard differentiable. Noting<lb...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformatics
سال: 2014
ISSN: 1460-2059,1367-4803
DOI: 10.1093/bioinformatics/btu719